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This problem appears to still exist. I have advanced systemcare v18.104.22.1682. After running the scan tool and restarting my PC, every metro app stopped working. I could not enter the store to reinstall nor could I go to the settings from the charms bar. I had to do a system restore to finally fix it. I ran a powershell command that fixed the problem with going to the store and was able to repair the apps but they stopped working again after another reboot. So I have not run the scan tool again because I don't want it to break my metro apps. This was all done on a brand new PC after running all of the Windows 8.1 updates.